Population genetic indices of veined Rapa whelk groups of the Black Sea remote regions

Valentin Toptikov; Tetyana Alieksieieva; Oleg Kovtun

doi:10.2478/trser-2021-0010

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Population genetic indices of veined Rapa whelk groups of the Black Sea remote regions

Transylvanian Review of Systematical and Ecological Research

Volume 24 (2022): Issue 2 (August 2022)

By: Valentin Toptikov , Tetyana Alieksieieva and Oleg Kovtun

Open Access

|Jan 2023

Abstract

Genetic structure and genetic distance of Rapana venosa populations from remote regions of the Black Sea (Odessa Bay and eastern Crimea, Ukraine) were defined. Despite the significant difference in morphometric parameters, the investigated samples of mollusks are genetically very similar, and the distance between them is at the level of local populations. Common features of observed groups of Rapana in the northern part of the Black Sea are the unequal occurrence of some alleles and genotypes, a high level of heterozygosity and nonequilibrium in the Hardy-Weinberg equation. The gene flow is the most significant of the evolutionary factors that form the genetic structure of Rapana venosa populations.

References

1. Altukhov Y. P., 2003 – Genetic processes in populations, Moscow, R. F., P. T. C. Academkniga, 431. (in Russisan)
Search in Google Scholar Back to article
2. Artamonov Y. V., Alexeev D. V., Shutov S. А., Deryushkin D. V., Lobachyov V. N., Skripaleva E. A., Shapovalov R. O., Shapovalov U. I. and Fedirko A. V., 2017 – Ecological safety of coastal and shelf zones, 1, 4-14. (in Russian)
Search in Google Scholar Back to article
3. An J., Yu H., Yu R., Kong L. and Li Q., 2013 – Isolation and characterization of 23 microsatellite loci in the veined rapa whelk (Rapana venosa), Conservation Genetics Resources, 5, 1049-1051, https://doi.org/10.1007/s12686-013-9967-8.10.1007/s12686-013-9967-8
Search in Google Scholar Back to article
4. Ayala F. J., Hedgecock G. S. and Zumwalt J. M. V., 1973 – Genetic variation in Tridacna maxima, ecological analog of some unsuccessful evolutionary lineages, Evolution, 27, 177-191.10.1111/j.1558-5646.1973.tb00664.x28564772
Search in Google Scholar Back to article
5. Ayala F. J., 1982 – Population and evolutionary genetics: a primer, Menlo Park, USA, Benjamin Cummings Pub Co, 268.
Search in Google Scholar Back to article
6. Ayala F. J. and Kiger J. A., 1984 – Modern genetics. Menlo Park, USA, Benjamin Cummings Pub Co, 923.
Search in Google Scholar Back to article
7. Băcescu M., 1963 – Gasteropodes ravisseurs de la mer Noire, Bruxelles, Belgium, Le Courrier industriel et scientifique, 73. (in French)
Search in Google Scholar Back to article
8. Belevich R. R., Skipa M. I. and Sryberko A. V., 2013 – Quantitative evaluation of mass transfer Black sea water flows on climate data, Ecological Safety of Coastal and Shelf Zones and Integrated Use of Shelf Resources, 27, 221-225. (in Russian)
Search in Google Scholar Back to article
9. Bondarev I. P., 2010 – Shell morphogenesis and intraspecific differentiation of Rapana venosa (Valenciennes, 1846), Ruthenica, 20, 2, 69-90. (in Russian)
Search in Google Scholar Back to article
10. Bondarev I. P., 2016 – Structure of Rapana venosa (Gastropoda, Muricidae) population of Sevastopol bays (the Black Sea), Marine Biological Journal, 1, 3, 14-21, https://doi.org/10.21072/mbj.01.03.02. (in Russian)10.21072/mbj.2016.01.3.02
Search in Google Scholar Back to article
11. Böhme M. U., Schneeweiß N., Fritz U., Schlegel M. and Berendonk T. U., 2007 – Small edge populations at risk: genetic diversity of the green lizard (Lacerta viridis viridis) in Germany and implications for conservation management, Conservation Genetics, 8, 555-563, https://doi.org/10.1007/s10592-006-9191-0.10.1007/s10592-006-9191-0
Search in Google Scholar Back to article
12. Chandler E. A., McDowell J. R. and Graver J. E., 2008 – Genetically monomorphic invasive populations of the rapa whelk, Rapana venosa, Molecular Ecology, 17, 4079-4091, https://doi.org/10.1111/j.1365-294X.2008.03897.x.10.1111/j.1365-294X.2008.03897.x
Search in Google Scholar Back to article
13. Chukchin V. D., 1961 – Rapana (Rapana bezoar) at the Gudautsk oyster bank, Trudy Sevastopo’skoy biologicheskoy stantsii (Proceedings of the Sevastopol Biological Station), 14, 178-187. (in Russian)
Search in Google Scholar Back to article
14. Chukchin V. D., 1970 – Functional morphology of rapa whelk. Kyiv, USSR, Naukova Dumka, 138. (in Russian)
Search in Google Scholar Back to article
15. Chukchin V. D., 1984 – The Ecology of Gastropods of the Black Sea, Kyiv, U.S.S.R., Naukova Dumka, 176. (in Russian)
Search in Google Scholar Back to article
16. Drapkin E. I., 1953 – New mollusks in the Black Sea, Priroda, 9, 92-95. (in Russian)
Search in Google Scholar Back to article
17. Eberzin A. G., 1951 – On the study of the Black Sea coquille-fauna structure in connection with Rapana invasion and on the importance of this event for the paleontology, Doklady Akademii nauk SSSR (Reports of the Academy of Sciences of the U.S.S.R.), 79, 5. (in Russian)
Search in Google Scholar Back to article
18. Fujio Y., Yamanaka R. and Smith P. J., 1983 – Genetic variation in marine mollusks, Bulllletin of Japanese Society of Scientific Fisheris, 49, 12, 1809-1817.10.2331/suisan.49.1809
Search in Google Scholar Back to article
19. Gaevskaya A. V., 2006 – Parasites, diseases and pests of mussels (Mytilus, Mytilidae), II, Mollusca, Sevastopol, Ukraine, EKOSI-Gidrofizika, 100. (in Russian)
Search in Google Scholar Back to article
20. Gazyetov Y. І., Andrіanova O. R., Medinet, V. І., Belevіch R. R. and Morozov V. M., 2015 – Assessment of the Danube river influence on some hydrological characteristics of the northwestern Black Sea in 2004-2013, Odessa National University Herald. Series Geography and Geology, 20, 4, 22-34. (in Russian)
Search in Google Scholar Back to article
21. Gomoiu M.-T., 2005 – Non-indigenous species in the Romanian Black Sea littoral zone: Mya arenaria, Rapana venosa and others, NEAR Curriculum in Natural Environmental Science, Terre et Environnement, 50, 155-176.
Search in Google Scholar Back to article
22. Ivanov V. A. and Belokopytov V. N., 2011 – Oceanography of the Black Sea, Sevastopol, Ukraine, ECOSY-Hydrophysics, 212. (in Russian)
Search in Google Scholar Back to article
23. Johnson G. B., 1974 – Enzyme polymorphisms and metabolism, Science, 184, 28-37.10.1126/science.184.4132.284360954
Search in Google Scholar Back to article
24. Kartavtsev Y. F., 2008 – Molecular evolution and population genetics, Vladivostok, R.F., Publishing house of the Far Eastern University, 307. (in Russian)
Search in Google Scholar Back to article
25. Kholina A. B., 2005 – Variability and structure of the populations Oxytropis chankaensis Jurtz (PhD Thesis), Institute of Biology and Soil Science, Vladivostok, R.F., 199. (in Russian)
Search in Google Scholar Back to article
26. Kimura M. and Maruyama T., 1971 – Pattern of neutral polymorphism in a geographically structured population, Genetics Research, 18, 125-131, https://doi.org/10.1017/S0016672300012520.10.1017/S0016672300012520
Search in Google Scholar Back to article
27. Kornienko G. G., Boyko N. E., Bugaev L. A., Dekhta V. A., Dudkin S. I., Kuzina V. F., Lozhichevskaya T. V., Rudnitskaya O. A. and Sergeeva S. G., 2005 – Physiological and biochemical and genetic studies of fish fauna of the Azov-Black Sea pool: Methodological Guide, Rostov-on-Don, RF, Everest, 105. (in Russian)
Search in Google Scholar Back to article
28. Kovtun O. O., Toptikov V. A. and Tots’kiy V. M., 2014 – Comparative morphological characteristic of Rapana venosa (Gastropoda: Muricidae, Rapaninae) from different water areas of the northern part of the Black sea, Odessa National University Herald. Series Biology, 19, 1, 68-80. (in Ukrainian)10.18524/2077-1746.2014.1(34).39991
Search in Google Scholar Back to article
29. Kuciñski M., Liszewski T., Krzyskow A., Fopp-Bayat D. and Laczyñska B., 2015 – Example of the application the microsatellite DNA fragments in the study of farmed European catfish (Silurus glanis, L.) broodstock, Archives of Polish Fisheries, 23, 91-99, https://doi.org/10.1515/aopf-2015-0010.10.1515/aopf-2015-0010
Search in Google Scholar Back to article
30. Leclair L. L. and Phelps S. R., 1994 – Genetic characteristics and relationships of five razor clam (Siliqua patula Dixon, 1789) populations along the Pacific coast of North America, Journal of Shellfish Research, 13, 207-216.
Search in Google Scholar Back to article
31. Li Ch., 1976 – First course in population genetics, California, USA, Pacific Grove, 631.
Search in Google Scholar Back to article
32. Manchenko G. P., 2003 – Handbook of detection of enzymes on electrophoretic gels, New York, USA, CRC Press LLC, 592.10.1201/9781420040531
Search in Google Scholar Back to article
33. Mann R. and Harding J. M., 2003 – Salinity tolerance of larval Rapana venosa: implications for dispersal and establishment of an invading predatory gastropod on the North American Atlantic coast, Biological Bulletin, 204, 96-103, https://doi.org/10.2307/1543499.10.2307/154349912588748
Search in Google Scholar Back to article
34. Mann R., Occhipinti A. and Harding J. M., 2004 – International Council for the Exploration of the Sea, Alien Species Alert: Rapana venosa (veined whelk), ICES Cooperative Research Report, 264, 14.
Search in Google Scholar Back to article
35. Mezhzherin S. V., 2001 – Genetic and taxonomic homogeneity of the eastern Asian mouse, Alsomys major (Rodentia: Muridae), Vestnik zoologii, 35, 2, 43-48. (in Russian)
Search in Google Scholar Back to article
36. Nei M., 1972 – Genetic distance between populations, American Naturalist, 106, 949, 283-292.10.1086/282771
Search in Google Scholar Back to article
37. Polonsky I. B., Shokurova I. G. and Belokopytov V. N., 2013 – Ten-year variability of temperature and salinity in the Black Sea, Marine Hydrophysical Journal, 6, 27-41. (in Russian)
Search in Google Scholar Back to article
38. Pudovkin A. I., 1998 – Allozyme population genetics of marine invertebrates (PhD Thesis), Institute of Marine Biology, Vladivostok, R.F., 67. (in Russian)
Search in Google Scholar Back to article
39. Savini D. and Occhipinti-Ambrogi A., 2006 – Consumption rates and prey preference of the invasive gastropod Rapana venosa in the Northern Adriatic Sea, Helgoland Marine Research, 60, 153-159, http://dx.doi.org/10.1007/s10152-006-0029-4.10.1007/s10152-006-0029-4
Search in Google Scholar Back to article
40. Shadrin N. V. and Afanasova T. A., 2009 – Nutrition and the distribution of Rapana venosa (Vallenciennes, 1846) in the waters of Opuksky Reserve (Eastern Crimea, the Black Sea), Marine Ecology Journal, 8, 2, 24. (in Russian)
Search in Google Scholar Back to article
41. Shinkarenko L. N., Guliakova O. G., Malienko V. A., Melnychuk S. D. and Spyrydonov V. G., 2010 – Analysis of genetic variation in dogs (American Pit Bull Terrier breed) with high inbreeding level using microsatellite markers, Cytology and Genetics, 44, 4, 16-22.10.3103/S0095452710040031
Search in Google Scholar Back to article
42. Slatkin M., 1985 – Gene flow in natural populations, Annual Review of Ecology and Systematics, 1985, 16, 393-430.10.1146/annurev.es.16.110185.002141
Search in Google Scholar Back to article
43. Stark I. N., 1957 – Gudautsk oyster bank, Priroda, 2, 94-95. (in Russian)
Search in Google Scholar Back to article
44. Sun X., Yu H., Yu R. and Li Q., 2014 – Characterization of 57 microsatellite loci for Rapana venosa using genomic sequencing, Conservation Genetics Resources, 6, 941-945.10.1007/s12686-014-0247-z
Search in Google Scholar Back to article
45. Tamaychuk A. N., 2009 – The peculiarities of space structure of the north-western part of the Black Sea, Scientific Notes of Taurida, Geography, 22, 61, 2, 139-147. (in Russian)
Search in Google Scholar Back to article
46. Toptikov V. A., Totsky V. N., Alieksieieva T. G. and Kovtun O. A., 2017 – Population genetic structure of veined Rapa whelk communities in the Northwestern Black sea, Cytology and Genetics, 51, 4, 253-262, https://doi.org/10.3103/s0095452717040107.10.3103/S0095452717040107
Search in Google Scholar Back to article
47. Toptikov V. A., Alieksieieva T. G., Kovtun O. A. and Totsky V. N., 2019 – Genetic structure in different subsequent generations of sexually mature Rapana venosa mollusks from the same biotope, Cytology and Genetics, 53, 1, 13-22. https://doi.org/10.3103/S0095452719010110.10.3103/S0095452719010110
Search in Google Scholar Back to article
48. Venter J. C., Adams M. D., Myers E. W., Li P. W., Mural P. I., Sutton G. G., Smith H. O., Jandell M., Rvans C. A., Holt R. A., Gocayne J. D., Amanatides P., Ballew R. M., Huson D. H., Wortman J. R., Zhang Q., Kodira C. D., Zheng X. D., Chen L., Skupski M., Subramanian G., Thomas P. D., Zhang J., Gabor Miklos G. L., Nelson C., Broder S., Clark A. G., Nadeau J., McKusick J. A., Zinder N., Levine A. J., Roberts R. J., Simon M., Slayman C., Hunkapiller M., Bolanos R., Delcher A., Dew I., Fasulo D., Flanigan M., Florea L., Halpern A., Hannenhalli S., Kravitz S., Levy S., Mobarry C., Reinert K., Remington K., Abu-Threideh J., Beasley E., Biddick K., Bonazzi V., Brandon R., Cargill M., Chandramouliswaran I., Charlab R., Chaturvedi K., Deng Z., Di Francesco V., Dunn P., Eilbeck K., Evangelista C., Gabrielian A. E., Gan W., Ge W., Gong F., Gu Z., Guan P., Heiman T. J., Higgins M. E., Ji R-R., Ke Z., Ketchum K. A., Zhongwu Lai Z., Lei Y., Li Z., Li J., Liang Y., Lin X., Lu F., Merkulov G. V., Milshina N., Moore H. M., Naik A. K., Narayan V. A., Neelam B., Nusskern D., Rusch D. B., Salzberg S., Shao W., Shue B., Sun J., Wang Z. Y., Wang A., Wang X., Wang J., Wei M-H., Wides R., Xiao C., Yan C., Yao A., Ye J., Zhan M., Zhang W., Zhang H., Zhao Q., Zheng L., Zhong F., Zhong W., Zhu S. C., Zhao S., Gilbert D., Baumhueter S., Spier G., Carter C., Cravchik A., Woodage T., Ali F., An H., Awe A., Baldwin D., Baden H., Barnstead M., Barrow I., Beeson K., Busam D., Carver A., Center A., Cheng M. L., Curry L., Danaher S., Davenport L., Desilets R., Dietz S., Dodson K., Doup L., Ferriera S., Garg N., Gluecksmann A., Hart B., Haynes J., Haynes C., Heiner C., Hladun S., Hostin D., Houck J., Howland T., Ibegwam C., Johnson J., Kalush F., Kline L., Koduru S., Love A., Mann F., May D., McCawley S., McIntosh T., McMullen I., Moy M., Moy L., Murphy B., Nelson K., Pfannkoch C., Pratts E., Puri V., Qureshi H., Reardon M., Rodriguez R., Rogers Y-H., Romblad D., Ruhfel B., Scott R., Sitter C., Smallwood M., Stewart E., Strong R., Suh E., Thomas R., Tint N. N., Tse S., Vech Wang G., Wetter J., Williams S., Williams M., Windsor S., Winn-Deen E., Wolfe K., Zaveri J., Zaveri K., Abril J. F., Guigó R., Campbell M. J., Sjolander K. J., Karlak B., Kejariwal A., Mi H., Lazareva B., Hatton T., Narechania A., Diemer K., Muruganujan A., Guo N., Sato S., Bafna V., Istrail S., Lippert R., Schwartz R., Walenz B., Yooseph S., Allen D., Basu A., Baxendale J., Blick L., Caminha M., Carnes-Stine J., Caulk P., Chiang Y-H., Coyne M., Dahlke C., Mays A. D., Dombroski M., Donnelly M., Ely D., Esparham S., Fosler C., Gire H., Glanowski S., Glasser K., Glodek A., Gorokhov M., Graham K., Gropman B., Harris M., Heil J., Henderson S., Hoover J., Jennings D., Jordan C., Jordan J., Kasha J., Kagan L., Kraft C., Levitsky A., Lewis M., Liu X., Lopez J., Ma D., Majoros W., McDaniel J., Murphy S., Newman M., Nguyen T., Nguyen N., Nodell M., Pan S., Peck J., Peterson M., Rowe W., Sanders R., Scott J., Simpson M., Smith T., Sprague A., Stockwell T., Turner T., Venter E., Wang M., Wen M., et al., 2001 – The sequence of the human genome, Science, 291, 1304-1351.10.1126/science.105804011181995
Search in Google Scholar Back to article
49. Venter J. C., 2003 – A part of the human genome sequence, Science, 299, 1183-1184.10.1126/science.299.5610.118312595674
Search in Google Scholar Back to article
50. Wolf J., Dietl G., Peškovičová D. and Langhammer M., 2001 – Heterozygosity between populations – a possible alternative to measures of genetic distance, Archiv für Tierzucht, Düsseldorf, 44, 2, 231-236.10.5194/aab-44-231-2001
Search in Google Scholar Back to article
51. Wright S., 1931 – Evolution in mendelian populations, Genetics, 16, 2, 97-159.10.1093/genetics/16.2.97120109117246615
Search in Google Scholar Back to article
52. Wright S., 1951 – The genetical structure of populations, Annals of Eugenics, 15, 323-354.10.1111/j.1469-1809.1949.tb02451.x24540312
Search in Google Scholar Back to article
53. Wright S., 1978 – Evolution and the genetics of populations, Variability within and among natural populations, Chicago, USA, The University of Chicago Press, 590.
Search in Google Scholar Back to article
54. Yang J., Li Q., Kong L. Zheng X. and Wang R., 2008 – Genetic structure of the veined rapa whelk (Rapana venosa) population along the coast of China, Biochemical Genetics, 46, 539-548, https://doi.org/10.1007/s10528-008-9168-4.10.1007/s10528-008-9168-418516671
Search in Google Scholar Back to article
55. Zaika V. E., Sergeeva N. G. and Kolesnikova E. A., 2010 – Alien species in bottom macrofauna of the Black Sea: their distribution and influence on benthic communities, Marine Ecological Journal, 9, 1, 5-7. (in Russian)
Search in Google Scholar Back to article
56. Zolotarev V., 1996 – The Black Sea ecosystem changes related to the introduction of new mollusk species, Marine Ecology, 17, 1-3, 227-236, https://doi.org/10.1111/j.1439-0485.1996.tb00504.x.10.1111/j.1439-0485.1996.tb00504.x
Search in Google Scholar Back to article

Articles in this issue

DOI: https://doi.org/10.2478/trser-2021-0010 | Journal eISSN: 2344-3219 | Journal ISSN: 1841-7051

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Language: English

Page range: 45 - 60

Published on: Jan 7, 2023

Published by: Lucian Blaga University of Sibiu

In partnership with: Paradigm Publishing Services

Publication frequency: 3 issues per year

Keywords:

Rapana venosa,

allozyme analysis,

genetic distance,

evolutionary factors,

gene flow

Related subjects:

Life sciences,

Ecology

© 2023 Valentin Toptikov, Tetyana Alieksieieva, Oleg Kovtun, published by Lucian Blaga University of Sibiu
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Volume 24 (2022): Issue 2 (August 2022)